MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Proteus mirabilis
19428wB5_irhom_Sw
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 61
bases: 3,945,692 bps
CDS: 3,505
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 80
misc RNA:
Total features: 3,596
Total number of protein coding genes annotated/found:
3,505
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Items 1 - 20
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5038|JADGLF010000001.1
SEQF5038_00796
Genome Viewer
NA
AA
1236/412
690-1925
Multidrug resistance protein MdtA
SEQF5038|JADGLF010000001.1
SEQF5038_00797
Genome Viewer
NA
AA
3132/1044
1925-5056
Multidrug resistance protein MdtB
SEQF5038|JADGLF010000001.1
SEQF5038_00798
Genome Viewer
NA
AA
3084/1028
5053-8136
Multidrug resistance protein MdtC
SEQF5038|JADGLF010000001.1
SEQF5038_00799
Genome Viewer
NA
AA
1377/459
8133-9509
Signal transduction histidine-protein kinase BaeS
SEQF5038|JADGLF010000001.1
SEQF5038_00800
Genome Viewer
NA
AA
708/236
9575-10282
Transcriptional regulatory protein BaeR
SEQF5038|JADGLF010000001.1
SEQF5038_00801
Genome Viewer
NA
AA
1380/460
10402-11781
23S rRNA 5-hydroxycytidine synthase
SEQF5038|JADGLF010000001.1
SEQF5038_00802
Genome Viewer
NA
AA
894/298
12091-12984
putative lipid kinase YegS
SEQF5038|JADGLF010000001.1
SEQF5038_00803
Genome Viewer
NA
AA
1050/350
13034-14083
Fructose-bisphosphate aldolase class 1
SEQF5038|JADGLF010000001.1
SEQF5038_00804
Genome Viewer
NA
AA
798/266
14933-14136
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
SEQF5038|JADGLF010000001.1
SEQF5038_00805
Genome Viewer
NA
AA
645/215
15397-16041
hypothetical protein
SEQF5038|JADGLF010000001.1
SEQF5038_00806
Genome Viewer
NA
AA
639/213
16659-17297
Lipid A palmitoyltransferase PagP
SEQF5038|JADGLF010000001.1
SEQF5038_00807
Genome Viewer
NA
AA
1383/461
18780-17398
Phenylalanine-specific permease
SEQF5038|JADGLF010000001.1
SEQF5038_00808
Genome Viewer
NA
AA
387/129
19441-19827
Regulatory protein SoxS
SEQF5038|JADGLF010000001.1
SEQF5038_00809
Genome Viewer
NA
AA
807/269
19951-20757
Sugar phosphatase YidA
SEQF5038|JADGLF010000001.1
SEQF5038_00810
Genome Viewer
NA
AA
1353/451
21059-22411
Branched-chain amino acid transport system 2 carrier protein
SEQF5038|JADGLF010000001.1
SEQF5038_00811
Genome Viewer
NA
AA
885/295
23363-22479
N-acetylmuramoyl-L-alanine amidase AmiD
SEQF5038|JADGLF010000001.1
SEQF5038_00812
Genome Viewer
NA
AA
1470/490
24963-23494
Amino-acid carrier protein AlsT
SEQF5038|JADGLF010000001.1
SEQF5038_00813
Genome Viewer
NA
AA
225/75
26319-26543
DNA polymerase III subunit theta
SEQF5038|JADGLF010000001.1
SEQF5038_00814
Genome Viewer
NA
AA
396/132
27055-26660
Protein YebF
SEQF5038|JADGLF010000001.1
SEQF5038_00815
Genome Viewer
NA
AA
183/61
27335-27153
hypothetical protein
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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